Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 MTX1P1-201ENST00000440904 838 ntBASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 MPRIPP1-201ENST00000452433 1089 ntBASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 AC020914.3-201ENST00000594712 304 ntBASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 AC022188.1-201ENST00000620960 1664 ntBASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.35■□□□□ 0.37
PDLIM7Q9NR12 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 HINT2P1-201ENST00000419438 481 ntBASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 AHCYP2-201ENST00000430630 1300 ntBASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PDLIM7Q9NR12 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.33■□□□□ 0.37
PDLIM7Q9NR12 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDLIM7Q9NR12 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PDLIM7Q9NR12 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.33■□□□□ 0.37
PDLIM7Q9NR12 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDLIM7Q9NR12 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.33■□□□□ 0.37
PDLIM7Q9NR12 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDLIM7Q9NR12 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 RPSAP36-202ENST00000494591 1261 ntBASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 AC026410.3-201ENST00000514280 936 ntBASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 AC104982.3-201ENST00000581995 514 ntBASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms