Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 AC123567.1-201ENST00000548294 1261 ntBASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 AL121723.1-201ENST00000445194 1519 ntBASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 CLK3P2-201ENST00000427566 1453 ntBASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 AL139384.1-201ENST00000612143 3047 ntBASIC16.03■□□□□ 0.16
ATP13A1Q9HD20 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 AC092850.2-201ENST00000623821 2697 ntBASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 RN7SL399P-201ENST00000471648 279 ntBASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 AC104596.2-201ENST00000512793 793 ntBASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 TP53TG3HP-202ENST00000569755 579 ntBASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 AC008494.3-201ENST00000606615 944 ntBASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 AC093726.1-201ENST00000608064 963 ntBASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP13A1Q9HD20 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 AC092384.3-202ENST00000564646 2873 ntBASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 AC022532.1-201ENST00000624563 1728 ntBASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.02■□□□□ 0.15
ATP13A1Q9HD20 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP13A1Q9HD20 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP13A1Q9HD20 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP13A1Q9HD20 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP13A1Q9HD20 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms