Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 AC007191.1-201ENST00000623179 2995 ntBASIC19.32■□□□□ 0.68
UPF2Q9HAU5 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 AC004987.2-201ENST00000395959 1148 ntBASIC19.32■□□□□ 0.68
UPF2Q9HAU5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UPF2Q9HAU5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 RHOQP3-201ENST00000437982 621 ntBASIC19.31■□□□□ 0.68
UPF2Q9HAU5 AC098859.1-201ENST00000502915 1238 ntBASIC19.31■□□□□ 0.68
UPF2Q9HAU5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 UNC93B6-202ENST00000528242 690 ntBASIC19.31■□□□□ 0.68
UPF2Q9HAU5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 FAM215A-202ENST00000632077 792 ntBASIC19.31■□□□□ 0.68
UPF2Q9HAU5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC19.31■□□□□ 0.68
UPF2Q9HAU5 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.31■□□□□ 0.68
UPF2Q9HAU5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF2Q9HAU5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 ZBED1P1-201ENST00000502364 1930 ntBASIC19.3■□□□□ 0.68
UPF2Q9HAU5 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 HCG4B-203ENST00000450128 991 ntBASIC19.3■□□□□ 0.68
UPF2Q9HAU5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms