Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 COX20P2-201ENST00000452636 358 ntBASIC18.41■□□□□ 0.54
RNF41Q9H4P4 ELK1P1-201ENST00000485699 580 ntBASIC18.41■□□□□ 0.54
RNF41Q9H4P4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 TMBIM7P-203ENST00000641617 1718 ntBASIC18.4■□□□□ 0.54
RNF41Q9H4P4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 AC105917.1-201ENST00000506637 2539 ntBASIC18.4■□□□□ 0.54
RNF41Q9H4P4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF41Q9H4P4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF41Q9H4P4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
RNF41Q9H4P4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF41Q9H4P4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF41Q9H4P4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 INTS4P2-202ENST00000614726 2019 ntBASIC18.39■□□□□ 0.53
RNF41Q9H4P4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 AC098614.1-201ENST00000368528 745 ntBASIC18.39■□□□□ 0.53
RNF41Q9H4P4 DGCR5-201ENST00000399539 862 ntBASIC18.39■□□□□ 0.53
RNF41Q9H4P4 AC134915.1-201ENST00000426461 574 ntBASIC18.39■□□□□ 0.53
RNF41Q9H4P4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 VDAC1P7-201ENST00000462417 847 ntBASIC18.39■□□□□ 0.53
RNF41Q9H4P4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 WASH4P-201ENST00000564273 1246 ntBASIC18.39■□□□□ 0.53
RNF41Q9H4P4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF41Q9H4P4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms