Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 SPDYE7P-202ENST00000420373 878 ntBASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 MIR6080-201ENST00000617359 66 ntBASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 AL122018.1-201ENST00000446607 2310 ntBASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCDC68Q9H2F9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 AP002414.2-201ENST00000591780 3365 ntBASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 AL035456.1-201ENST00000456064 1369 ntBASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 SSR4P1-203ENST00000599569 2260 ntBASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 CNN2P11-201ENST00000429351 262 ntBASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 MTND6P24-201ENST00000440466 518 ntBASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 EEF1DP4-201ENST00000446006 880 ntBASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 AC026150.2-201ENST00000564693 1156 ntBASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms