Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIK2Q9H0K1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 AC023310.3-201ENST00000557027 670 ntBASIC16.28■□□□□ 0.2
SIK2Q9H0K1 AC100756.1-201ENST00000562736 682 ntBASIC16.28■□□□□ 0.2
SIK2Q9H0K1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 AC138749.3-201ENST00000567691 622 ntBASIC16.28■□□□□ 0.2
SIK2Q9H0K1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 AC116165.1-201ENST00000611806 668 ntBASIC16.28■□□□□ 0.2
SIK2Q9H0K1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 AC127383.1-201ENST00000444697 1800 ntBASIC16.28■□□□□ 0.2
SIK2Q9H0K1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 AC007541.1-201ENST00000570282 1469 ntBASIC16.28■□□□□ 0.2
SIK2Q9H0K1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SIK2Q9H0K1 AC009090.5-201ENST00000624886 2285 ntBASIC16.28■□□□□ 0.2
SIK2Q9H0K1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 AC138761.1-201ENST00000584393 385 ntBASIC16.27■□□□□ 0.2
SIK2Q9H0K1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.27■□□□□ 0.2
SIK2Q9H0K1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SIK2Q9H0K1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SIK2Q9H0K1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIK2Q9H0K1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIK2Q9H0K1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.27■□□□□ 0.19
SIK2Q9H0K1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.27■□□□□ 0.19
SIK2Q9H0K1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.27■□□□□ 0.19
SIK2Q9H0K1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.27■□□□□ 0.19
SIK2Q9H0K1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.27■□□□□ 0.19
SIK2Q9H0K1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SIK2Q9H0K1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SIK2Q9H0K1 MIR3197-201ENST00000582241 73 ntBASIC16.26■□□□□ 0.19
SIK2Q9H0K1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms