Protein–RNA interactions for Protein: Q9C0K0

BCL11B, B-cell lymphoma/leukemia 11B, humanhuman

Predicted RBP Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL11BQ9C0K0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 AC018695.7-201ENST00000624587 2492 ntBASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 AL008707.1-201ENST00000422498 534 ntBASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 PRKXP1-201ENST00000561423 1122 ntBASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 RN7SL371P-201ENST00000578099 267 ntBASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 MIR4750-201ENST00000584564 56 ntBASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 TCAF2P1-201ENST00000291129 2421 ntBASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
BCL11BQ9C0K0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
BCL11BQ9C0K0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BCL11BQ9C0K0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
BCL11BQ9C0K0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BCL11BQ9C0K0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC20.27■□□□□ 0.83
BCL11BQ9C0K0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BCL11BQ9C0K0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
BCL11BQ9C0K0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
BCL11BQ9C0K0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 AC079178.1-201ENST00000420915 656 ntBASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 RN7SL48P-201ENST00000579283 293 ntBASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 AC244157.2-201ENST00000616239 1006 ntBASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 UBALD1-205ENST00000590891 2641 ntBASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 REXO1L1P-202ENST00000608646 1974 ntBASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCL11BQ9C0K0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 AL355334.1-201ENST00000417713 215 ntBASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCL11BQ9C0K0 EEF1DP6-201ENST00000449232 372 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms