Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 AC026150.2-201ENST00000564693 1156 ntBASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 AC009093.7-201ENST00000623853 1223 ntBASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 MST1L-201ENST00000442552 2185 ntBASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 AC091951.1-201ENST00000512854 2465 ntBASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 AC023024.2-201ENST00000623561 1993 ntBASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 AC139530.3-201ENST00000620344 690 ntBASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BHLHE41Q9C0J9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 AGAP7P-201ENST00000582299 2062 ntBASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 AGAP14-201ENST00000624701 2060 ntBASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 AL513477.1-201ENST00000602865 2407 ntBASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 AC023141.5-201ENST00000458585 616 ntBASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms