Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM6Q9C030 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM6Q9C030 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM6Q9C030 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM6Q9C030 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM6Q9C030 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRIM6Q9C030 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM6Q9C030 RPL13P2-201ENST00000440687 659 ntBASIC17.27■□□□□ 0.36
TRIM6Q9C030 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM6Q9C030 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM6Q9C030 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM6Q9C030 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TRIM6Q9C030 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TRIM6Q9C030 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM6Q9C030 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.27■□□□□ 0.36
TRIM6Q9C030 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM6Q9C030 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRIM6Q9C030 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM6Q9C030 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
TRIM6Q9C030 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM6Q9C030 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM6Q9C030 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.27■□□□□ 0.35
TRIM6Q9C030 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM6Q9C030 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM6Q9C030 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM6Q9C030 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM6Q9C030 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM6Q9C030 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
TRIM6Q9C030 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM6Q9C030 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM6Q9C030 CLK3P2-201ENST00000427566 1453 ntBASIC17.26■□□□□ 0.35
TRIM6Q9C030 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM6Q9C030 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM6Q9C030 AC024909.3-201ENST00000611513 2257 ntBASIC17.26■□□□□ 0.35
TRIM6Q9C030 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM6Q9C030 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM6Q9C030 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 MTHFR-217ENST00000641820 1569 ntBASIC17.26■□□□□ 0.35
TRIM6Q9C030 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM6Q9C030 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM6Q9C030 DBET-201ENST00000630918 3363 ntBASIC17.26■□□□□ 0.35
TRIM6Q9C030 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM6Q9C030 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM6Q9C030 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM6Q9C030 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 SLED1-202ENST00000512051 380 ntBASIC17.25■□□□□ 0.35
TRIM6Q9C030 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms