Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 NME2-201ENST00000393183 568 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 TSPY22P-201ENST00000427496 604 ntBASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AL355075.4-201ENST00000554988 638 ntBASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AC087641.1-201ENST00000557561 1021 ntBASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 MIR4651-201ENST00000582622 73 ntBASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 OR13I1P-201ENST00000609811 1264 ntBASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SIGLEC16-201ENST00000599858 1437 ntBASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AC079781.5-202ENST00000641784 3743 ntBASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AC004899.2-201ENST00000622993 3860 ntBASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms