Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AC005034.1-201ENST00000426657 489 ntBASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 RRP7BP-205ENST00000566851 833 ntBASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AC099568.2-201ENST00000609194 695 ntBASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AC007431.3-201ENST00000623221 587 ntBASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 AC136604.1-201ENST00000418535 575 ntBASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 SLED1-202ENST00000512051 380 ntBASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 AP005018.1-201ENST00000525475 301 ntBASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 HNRNPUP1-201ENST00000554987 333 ntBASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.12□□□□□ -0.31
SSBP3Q9BWW4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms