Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 SERBP1P3-201ENST00000459980 809 ntBASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 RN7SL618P-201ENST00000477850 296 ntBASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 RN7SL204P-201ENST00000582831 262 ntBASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 LINC02560-201ENST00000596379 459 ntBASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 AC087499.5-201ENST00000452760 1342 ntBASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 AC073347.1-201ENST00000421633 2643 ntBASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 AL080243.2-201ENST00000418783 582 ntBASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 TSSK5P-201ENST00000423978 907 ntBASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 AC008761.3-201ENST00000624803 892 ntBASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 FAM45BP-202ENST00000592932 1624 ntBASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms