Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USB1Q9BQ65 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USB1Q9BQ65 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USB1Q9BQ65 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.17□□□□□ -0.14
USB1Q9BQ65 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AC079414.2-201ENST00000567157 1104 ntBASIC14.16□□□□□ -0.14
USB1Q9BQ65 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AL355816.2-201ENST00000610049 647 ntBASIC14.16□□□□□ -0.14
USB1Q9BQ65 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 TEX28P1-201ENST00000613479 1221 ntBASIC14.16□□□□□ -0.14
USB1Q9BQ65 TEX28P2-201ENST00000617764 1221 ntBASIC14.16□□□□□ -0.14
USB1Q9BQ65 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 HLA-A-202ENST00000376806 1854 ntBASIC14.16□□□□□ -0.14
USB1Q9BQ65 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USB1Q9BQ65 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
USB1Q9BQ65 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 AC063926.3-201ENST00000624734 5658 ntBASIC14.15□□□□□ -0.14
USB1Q9BQ65 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 TSSK5P-201ENST00000423978 907 ntBASIC14.15□□□□□ -0.14
USB1Q9BQ65 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 RSL24D1P2-201ENST00000445584 366 ntBASIC14.15□□□□□ -0.14
USB1Q9BQ65 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 RN7SL618P-201ENST00000477850 296 ntBASIC14.15□□□□□ -0.14
USB1Q9BQ65 NPM1P28-201ENST00000492269 840 ntBASIC14.15□□□□□ -0.14
USB1Q9BQ65 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms