Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCL13Q99616 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCL13Q99616 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL13Q99616 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.15□□□□□ -0.3
CCL13Q99616 MIR4745-201ENST00000577608 62 ntBASIC13.15□□□□□ -0.3
CCL13Q99616 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.15□□□□□ -0.3
CCL13Q99616 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.15□□□□□ -0.3
CCL13Q99616 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.15□□□□□ -0.3
CCL13Q99616 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.15□□□□□ -0.3
CCL13Q99616 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL13Q99616 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.15□□□□□ -0.3
CCL13Q99616 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.15□□□□□ -0.3
CCL13Q99616 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 AC127383.1-201ENST00000444697 1800 ntBASIC13.15□□□□□ -0.3
CCL13Q99616 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL13Q99616 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCL13Q99616 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCL13Q99616 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL13Q99616 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CCL13Q99616 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCL13Q99616 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL13Q99616 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL13Q99616 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL13Q99616 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CCL13Q99616 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL13Q99616 AC015922.1-201ENST00000421102 1152 ntBASIC13.14□□□□□ -0.31
CCL13Q99616 GNAQP1-201ENST00000444815 1067 ntBASIC13.14□□□□□ -0.31
CCL13Q99616 AL589987.1-201ENST00000453380 819 ntBASIC13.14□□□□□ -0.31
CCL13Q99616 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCL13Q99616 SERBP1P5-201ENST00000510079 1181 ntBASIC13.14□□□□□ -0.31
CCL13Q99616 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CCL13Q99616 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CCL13Q99616 SRD5A3P1-201ENST00000603021 949 ntBASIC13.14□□□□□ -0.31
CCL13Q99616 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 AC105917.1-201ENST00000506637 2539 ntBASIC13.14□□□□□ -0.31
CCL13Q99616 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCL13Q99616 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL13Q99616 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CCL13Q99616 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL13Q99616 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCL13Q99616 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL13Q99616 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL13Q99616 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CCL13Q99616 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL13Q99616 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CCL13Q99616 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms