Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AL121723.1-201ENST00000445194 1519 ntBASIC16.21■□□□□ 0.19
HAPLN3Q96S86 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AC023310.3-201ENST00000557027 670 ntBASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AC100756.1-201ENST00000562736 682 ntBASIC16.21■□□□□ 0.19
HAPLN3Q96S86 RRP7BP-205ENST00000566851 833 ntBASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AC138749.3-201ENST00000567691 622 ntBASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AC000095.1-201ENST00000603208 874 ntBASIC16.21■□□□□ 0.19
HAPLN3Q96S86 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AC004233.3-201ENST00000607794 1269 ntBASIC16.21■□□□□ 0.19
HAPLN3Q96S86 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AC116165.1-201ENST00000611806 668 ntBASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AL158212.4-201ENST00000624062 1286 ntBASIC16.21■□□□□ 0.19
HAPLN3Q96S86 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 TNRC18P2-201ENST00000417666 2714 ntBASIC16.21■□□□□ 0.19
HAPLN3Q96S86 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HAPLN3Q96S86 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HAPLN3Q96S86 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HAPLN3Q96S86 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HAPLN3Q96S86 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HAPLN3Q96S86 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 DFFBP1-201ENST00000433250 979 ntBASIC16.2■□□□□ 0.18
HAPLN3Q96S86 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 AC099568.2-201ENST00000609194 695 ntBASIC16.2■□□□□ 0.18
HAPLN3Q96S86 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HAPLN3Q96S86 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.19■□□□□ 0.18
HAPLN3Q96S86 AC006058.4-201ENST00000624016 1670 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms