Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 AL139010.1-201ENST00000454878 894 ntBASIC14.88□□□□□ -0.03
COL21A1Q96P44 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 AC018892.3-201ENST00000623986 2499 ntBASIC14.88□□□□□ -0.03
COL21A1Q96P44 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.87□□□□□ -0.03
COL21A1Q96P44 AL035456.1-201ENST00000456064 1369 ntBASIC14.87□□□□□ -0.03
COL21A1Q96P44 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 AL691432.1-201ENST00000596308 1422 ntBASIC14.87□□□□□ -0.03
COL21A1Q96P44 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 FAM86GP-201ENST00000448322 971 ntBASIC14.87□□□□□ -0.03
COL21A1Q96P44 AC067863.1-201ENST00000494933 530 ntBASIC14.87□□□□□ -0.03
COL21A1Q96P44 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 AC105021.1-202ENST00000570572 669 ntBASIC14.87□□□□□ -0.03
COL21A1Q96P44 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 AC015911.4-201ENST00000588022 1070 ntBASIC14.87□□□□□ -0.03
COL21A1Q96P44 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 AC105250.1-201ENST00000509378 2057 ntBASIC14.87□□□□□ -0.03
COL21A1Q96P44 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 TUBB3P1-201ENST00000405796 1332 ntBASIC14.87□□□□□ -0.03
COL21A1Q96P44 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
COL21A1Q96P44 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL21A1Q96P44 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms