Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.78□□□□□ -0.36
ZNF48Q96MX3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 AC069224.1-201ENST00000566372 1715 ntBASIC12.77□□□□□ -0.36
ZNF48Q96MX3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF48Q96MX3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 COX11-210ENST00000639671 696 ntBASIC12.77□□□□□ -0.37
ZNF48Q96MX3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.77□□□□□ -0.37
ZNF48Q96MX3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 AL442647.2-201ENST00000429864 857 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 KRT223P-202ENST00000449164 1292 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 AC022494.1-201ENST00000466044 728 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 FAM86LP-201ENST00000478302 853 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 BTNL10-201ENST00000595971 695 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 AC133552.6-201ENST00000613406 534 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 CU634019.7-201ENST00000624153 1185 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 FP236241.2-201ENST00000624906 1185 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 AL033527.4-201ENST00000641026 673 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 AC018665.1-201ENST00000622927 1362 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms