Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 AC074386.1-202ENST00000463561 864 ntBASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 PDPK2P-202ENST00000562415 1191 ntBASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 LINC00528-201ENST00000600723 2160 ntBASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 RPL13AP23-201ENST00000480739 586 ntBASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 AC112191.1-201ENST00000523689 701 ntBASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 AC018845.2-201ENST00000568326 409 ntBASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 LINC00552-201ENST00000625151 2579 ntBASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DNAAF1Q8NEP3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 AC007191.1-201ENST00000623179 2995 ntBASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms