Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 AC104457.1-201ENST00000401024 814 ntBASIC12.67□□□□□ -0.38
LINC00311Q8N616 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 CYMP-203ENST00000474680 1263 ntBASIC12.67□□□□□ -0.38
LINC00311Q8N616 AC093214.1-201ENST00000511688 1107 ntBASIC12.67□□□□□ -0.38
LINC00311Q8N616 RNA5SP421-201ENST00000516864 134 ntBASIC12.67□□□□□ -0.38
LINC00311Q8N616 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 AC005498.2-205ENST00000593218 784 ntBASIC12.67□□□□□ -0.38
LINC00311Q8N616 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 AC004840.1-201ENST00000636359 365 ntBASIC12.67□□□□□ -0.38
LINC00311Q8N616 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 MROH4P-201ENST00000431302 1578 ntBASIC12.67□□□□□ -0.38
LINC00311Q8N616 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 WASH3P-207ENST00000560956 1394 ntBASIC12.67□□□□□ -0.38
LINC00311Q8N616 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00311Q8N616 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
LINC00311Q8N616 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LINC00311Q8N616 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00311Q8N616 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00311Q8N616 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC00311Q8N616 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00311Q8N616 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC00311Q8N616 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00311Q8N616 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC00311Q8N616 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms