Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 AC104640.1-201ENST00000562617 2109 ntBASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 LINC02228-204ENST00000642115 2962 ntBASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 OR2I1P-210ENST00000642037 4691 ntBASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 FO538757.1-201ENST00000623083 1397 ntBASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 AC136621.1-201ENST00000624017 2304 ntBASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 RPL37AP1-201ENST00000412502 279 ntBASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 AL080243.2-201ENST00000418783 582 ntBASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 AL033527.5-202ENST00000641632 1098 ntBASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TTC9CQ8N5M4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms