Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 OR7E47P-204ENST00000575924 449 ntBASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEPDC4Q8N2C3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEPDC4Q8N2C3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEPDC4Q8N2C3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEPDC4Q8N2C3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEPDC4Q8N2C3 AC112693.3-201ENST00000624819 1983 ntBASIC14.71□□□□□ -0.06
DEPDC4Q8N2C3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEPDC4Q8N2C3 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.71□□□□□ -0.06
DEPDC4Q8N2C3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEPDC4Q8N2C3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
DEPDC4Q8N2C3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEPDC4Q8N2C3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 AL645728.2-201ENST00000641974 660 ntBASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 C18orf15-201ENST00000623680 2534 ntBASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEPDC4Q8N2C3 AP001282.1-201ENST00000531301 1499 ntBASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 AC013726.1-201ENST00000563747 2285 ntBASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 AL137784.3-201ENST00000623858 2288 ntBASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 AC023908.3-201ENST00000564211 3047 ntBASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 AC026748.1-201ENST00000624349 3251 ntBASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms