Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 AC100756.1-201ENST00000562736 682 ntBASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 AC138749.3-201ENST00000567691 622 ntBASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 AC087481.3-201ENST00000602886 1894 ntBASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 AC116165.1-201ENST00000611806 668 ntBASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 AC008761.3-201ENST00000624803 892 ntBASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 AC138969.3-201ENST00000546612 1459 ntBASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 AC138932.2-201ENST00000548268 1459 ntBASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 AC126755.4-201ENST00000549796 1459 ntBASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 AL162727.3-201ENST00000635661 2787 ntBASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 FAM207CP-201ENST00000443486 507 ntBASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 TPRX2P-201ENST00000535362 881 ntBASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 AL008721.1-201ENST00000609964 604 ntBASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCUBE3Q8IX30 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 AC073347.1-201ENST00000421633 2643 ntBASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 AL359881.2-201ENST00000602973 570 ntBASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCUBE3Q8IX30 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms