Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 AC087481.3-201ENST00000602886 1894 ntBASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
RAB11FIP4Q86YS3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.39■□□□□ 0.54
RAB11FIP4Q86YS3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB11FIP4Q86YS3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.39■□□□□ 0.54
RAB11FIP4Q86YS3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB11FIP4Q86YS3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB11FIP4Q86YS3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB11FIP4Q86YS3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB11FIP4Q86YS3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RAB11FIP4Q86YS3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 SLED1-202ENST00000512051 380 ntBASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB11FIP4Q86YS3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11FIP4Q86YS3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RAB11FIP4Q86YS3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB11FIP4Q86YS3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RAB11FIP4Q86YS3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11FIP4Q86YS3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11FIP4Q86YS3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB11FIP4Q86YS3 AC091951.1-201ENST00000512854 2465 ntBASIC18.38■□□□□ 0.53
RAB11FIP4Q86YS3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11FIP4Q86YS3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RAB11FIP4Q86YS3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB11FIP4Q86YS3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms