Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 MARK2P5-201ENST00000507649 634 ntBASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT28Q7Z3Y7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 TUBB8P8-201ENST00000458717 1058 ntBASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 AC103988.2-201ENST00000561804 725 ntBASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 AC005324.6-201ENST00000587972 613 ntBASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 AC020922.3-201ENST00000595064 547 ntBASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 AC073352.2-201ENST00000609385 439 ntBASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
KRT28Q7Z3Y7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
KRT28Q7Z3Y7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT28Q7Z3Y7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT28Q7Z3Y7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
KRT28Q7Z3Y7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.83■□□□□ 0.92
KRT28Q7Z3Y7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
KRT28Q7Z3Y7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 MESTP3-201ENST00000503460 968 ntBASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 PCBP2-OT1-201ENST00000634357 590 ntBASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 AL157791.1-201ENST00000553667 1699 ntBASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT28Q7Z3Y7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 CEP164P1-201ENST00000455142 418 ntBASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 MIR4683-201ENST00000579659 81 ntBASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 AL162426.1-201ENST00000624141 743 ntBASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 AL603764.1-201ENST00000636452 321 ntBASIC20.81■□□□□ 0.92
KRT28Q7Z3Y7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms