Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHMP1BQ7LBR1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 AC105021.1-202ENST00000570572 669 ntBASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 AC005498.2-205ENST00000593218 784 ntBASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 RN7SL828P-201ENST00000607615 303 ntBASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
CHMP1BQ7LBR1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 AL009178.2-201ENST00000597278 2719 ntBASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 AC097493.3-201ENST00000509725 367 ntBASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 AL365203.3-201ENST00000609742 2057 ntBASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.57□□□□□ -0.08
CHMP1BQ7LBR1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 CICP13-201ENST00000422015 2789 ntBASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 AC241585.1-201ENST00000433527 519 ntBASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms