Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 AL450472.2-201ENST00000603663 1156 ntBASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 AC140113.2-201ENST00000604370 208 ntBASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 FAM197Y3-203ENST00000618346 717 ntBASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 ST20-AS1-201ENST00000560255 4223 ntBASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 AC106881.1-201ENST00000605849 3329 ntBASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 HLA-H-201ENST00000383620 1096 ntBASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 AL139010.1-201ENST00000454878 894 ntBASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.37□□□□□ -0.11
SMARCD3Q6STE5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 KRT8P37-201ENST00000451609 1420 ntBASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 FAM58CP-201ENST00000435741 640 ntBASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 AC106730.1-201ENST00000566722 1090 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms