Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHC4Q6S5L8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHC4Q6S5L8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.66■□□□□ 0.42
SHC4Q6S5L8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHC4Q6S5L8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHC4Q6S5L8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHC4Q6S5L8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHC4Q6S5L8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHC4Q6S5L8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 SNHG9-202ENST00000564014 471 ntBASIC17.65■□□□□ 0.42
SHC4Q6S5L8 AC015910.1-201ENST00000579400 975 ntBASIC17.65■□□□□ 0.42
SHC4Q6S5L8 TEX28P1-201ENST00000613479 1221 ntBASIC17.65■□□□□ 0.42
SHC4Q6S5L8 AL138828.2-201ENST00000615812 383 ntBASIC17.65■□□□□ 0.42
SHC4Q6S5L8 TEX28P2-201ENST00000617764 1221 ntBASIC17.65■□□□□ 0.42
SHC4Q6S5L8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.65■□□□□ 0.42
SHC4Q6S5L8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
SHC4Q6S5L8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SHC4Q6S5L8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.64■□□□□ 0.42
SHC4Q6S5L8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.64■□□□□ 0.42
SHC4Q6S5L8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.64■□□□□ 0.42
SHC4Q6S5L8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
SHC4Q6S5L8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
SHC4Q6S5L8 FGD5P1-202ENST00000614866 2498 ntBASIC17.64■□□□□ 0.42
SHC4Q6S5L8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SHC4Q6S5L8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 HLA-V-204ENST00000476601 1289 ntBASIC17.64■□□□□ 0.41
SHC4Q6S5L8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 AC010336.2-201ENST00000564226 506 ntBASIC17.64■□□□□ 0.41
SHC4Q6S5L8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 Z92544.3-201ENST00000624747 417 ntBASIC17.64■□□□□ 0.41
SHC4Q6S5L8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 FO538757.1-201ENST00000623083 1397 ntBASIC17.64■□□□□ 0.41
SHC4Q6S5L8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC4Q6S5L8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms