Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 TSPY26P-202ENST00000565928 3884 ntBASIC14.18□□□□□ -0.14
RTL6Q6ICC9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 RN7SL399P-201ENST00000471648 279 ntBASIC14.18□□□□□ -0.14
RTL6Q6ICC9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 AL158212.4-201ENST00000624062 1286 ntBASIC14.18□□□□□ -0.14
RTL6Q6ICC9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RTL6Q6ICC9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.17□□□□□ -0.14
RTL6Q6ICC9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 AC104596.2-201ENST00000512793 793 ntBASIC14.17□□□□□ -0.14
RTL6Q6ICC9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 AC017083.2-201ENST00000608069 979 ntBASIC14.17□□□□□ -0.14
RTL6Q6ICC9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 AL033527.5-201ENST00000641382 801 ntBASIC14.17□□□□□ -0.14
RTL6Q6ICC9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTL6Q6ICC9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms