Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC152010.1-201ENST00000415779 2006 ntBASIC14.84□□□□□ -0.03
LPCAT4Q643R3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 AL645939.2-201ENST00000427340 991 ntBASIC14.84□□□□□ -0.03
LPCAT4Q643R3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 BX276092.5-203ENST00000456199 560 ntBASIC14.84□□□□□ -0.03
LPCAT4Q643R3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 AL121672.3-201ENST00000608644 468 ntBASIC14.84□□□□□ -0.03
LPCAT4Q643R3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.84□□□□□ -0.03
LPCAT4Q643R3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
LPCAT4Q643R3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
LPCAT4Q643R3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LPCAT4Q643R3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.83□□□□□ -0.03
LPCAT4Q643R3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LPCAT4Q643R3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.83□□□□□ -0.03
LPCAT4Q643R3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 GGTLC5P-201ENST00000617623 998 ntBASIC14.83□□□□□ -0.04
LPCAT4Q643R3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LPCAT4Q643R3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 AC012569.1-201ENST00000591191 1524 ntBASIC14.82□□□□□ -0.04
LPCAT4Q643R3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 AC018529.2-202ENST00000611482 3087 ntBASIC14.82□□□□□ -0.04
LPCAT4Q643R3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 AC011474.4-201ENST00000623523 2076 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms