Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.22■□□□□ 0.51
CERKLQ49MI3 AC145423.3-201ENST00000615987 467 ntBASIC18.22■□□□□ 0.51
CERKLQ49MI3 RHOXF1P1-202ENST00000635473 501 ntBASIC18.22■□□□□ 0.51
CERKLQ49MI3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CERKLQ49MI3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.22■□□□□ 0.51
CERKLQ49MI3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CERKLQ49MI3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.22■□□□□ 0.51
CERKLQ49MI3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CERKLQ49MI3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CERKLQ49MI3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CERKLQ49MI3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CERKLQ49MI3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.22■□□□□ 0.51
CERKLQ49MI3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CERKLQ49MI3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 AL118508.1-201ENST00000613502 2345 ntBASIC18.21■□□□□ 0.51
CERKLQ49MI3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 MIR1908-201ENST00000410394 80 ntBASIC18.21■□□□□ 0.51
CERKLQ49MI3 CNN2P8-201ENST00000421872 913 ntBASIC18.21■□□□□ 0.51
CERKLQ49MI3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CERKLQ49MI3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.21■□□□□ 0.51
CERKLQ49MI3 KRT8P35-201ENST00000483942 1338 ntBASIC18.21■□□□□ 0.51
CERKLQ49MI3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 AC022188.1-201ENST00000620960 1664 ntBASIC18.2■□□□□ 0.5
CERKLQ49MI3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 ACTBP11-201ENST00000436287 1126 ntBASIC18.2■□□□□ 0.5
CERKLQ49MI3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 AC022494.1-201ENST00000466044 728 ntBASIC18.2■□□□□ 0.5
CERKLQ49MI3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 MIR4538-201ENST00000581377 78 ntBASIC18.2■□□□□ 0.5
CERKLQ49MI3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CERKLQ49MI3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 TUBB1P2-201ENST00000422712 1306 ntBASIC18.2■□□□□ 0.5
CERKLQ49MI3 TUBB1P1-201ENST00000503144 1300 ntBASIC18.2■□□□□ 0.5
CERKLQ49MI3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.2■□□□□ 0.5
CERKLQ49MI3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CERKLQ49MI3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CERKLQ49MI3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CERKLQ49MI3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.19■□□□□ 0.5
CERKLQ49MI3 AC127383.1-201ENST00000444697 1800 ntBASIC18.19■□□□□ 0.5
CERKLQ49MI3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CERKLQ49MI3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CERKLQ49MI3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CERKLQ49MI3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CERKLQ49MI3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CERKLQ49MI3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CERKLQ49MI3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms