Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 C8orf49-201ENST00000525043 1968 ntBASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ANKRD55Q3KP44 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
ANKRD55Q3KP44 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
ANKRD55Q3KP44 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ANKRD55Q3KP44 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ANKRD55Q3KP44 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ANKRD55Q3KP44 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
ANKRD55Q3KP44 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.31
ANKRD55Q3KP44 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ANKRD55Q3KP44 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 BX640514.1-201ENST00000583223 1918 ntBASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 AC073439.1-201ENST00000624121 1774 ntBASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 AC136632.2-201ENST00000512891 861 ntBASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 AC021087.4-201ENST00000563761 564 ntBASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 AP001005.1-201ENST00000571755 1248 ntBASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 AC104692.2-201ENST00000603054 253 ntBASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ANKRD55Q3KP44 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 KRT18P34-201ENST00000488218 1270 ntBASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 OR7E14P-202ENST00000530490 1290 ntBASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms