Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 OR6D1P-202ENST00000641007 5290 ntBASIC15.04■□□□□ -0
RSPO4Q2I0M5 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RSPO4Q2I0M5 AC005915.1-201ENST00000624912 2018 ntBASIC15.04■□□□□ -0
RSPO4Q2I0M5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.04■□□□□ -0
RSPO4Q2I0M5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 PCGF3-213ENST00000620529 1899 ntBASIC15.03■□□□□ -0
RSPO4Q2I0M5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 BNIP3P1-202ENST00000550043 1585 ntBASIC15.03■□□□□ -0
RSPO4Q2I0M5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 ACTBP8-201ENST00000403258 1108 ntBASIC15.03■□□□□ -0
RSPO4Q2I0M5 AL139008.1-201ENST00000437894 228 ntBASIC15.03■□□□□ -0
RSPO4Q2I0M5 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 PIN4P1-201ENST00000451079 396 ntBASIC15.03■□□□□ -0
RSPO4Q2I0M5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 AP001002.3-201ENST00000623482 206 ntBASIC15.03■□□□□ -0
RSPO4Q2I0M5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
RSPO4Q2I0M5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO4Q2I0M5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms