Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
IRX4P78413 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.41■□□□□ 0.22
IRX4P78413 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.41■□□□□ 0.22
IRX4P78413 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.41■□□□□ 0.22
IRX4P78413 AC140912.1-201ENST00000577171 1054 ntBASIC16.41■□□□□ 0.22
IRX4P78413 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.41■□□□□ 0.22
IRX4P78413 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 LINC01144-201ENST00000626198 1710 ntBASIC16.41■□□□□ 0.22
IRX4P78413 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IRX4P78413 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.41■□□□□ 0.22
IRX4P78413 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IRX4P78413 AC087499.5-201ENST00000452760 1342 ntBASIC16.41■□□□□ 0.22
IRX4P78413 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
IRX4P78413 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.41■□□□□ 0.22
IRX4P78413 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
IRX4P78413 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IRX4P78413 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 OR2I1P-209ENST00000641730 5365 ntBASIC16.4■□□□□ 0.22
IRX4P78413 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IRX4P78413 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX4P78413 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
IRX4P78413 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX4P78413 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.4■□□□□ 0.22
IRX4P78413 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.4■□□□□ 0.22
IRX4P78413 POU5F1P6-201ENST00000466990 990 ntBASIC16.4■□□□□ 0.22
IRX4P78413 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX4P78413 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.4■□□□□ 0.22
IRX4P78413 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
IRX4P78413 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.4■□□□□ 0.22
IRX4P78413 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.4■□□□□ 0.22
IRX4P78413 TEX28P1-201ENST00000613479 1221 ntBASIC16.4■□□□□ 0.22
IRX4P78413 TEX28P2-201ENST00000617764 1221 ntBASIC16.4■□□□□ 0.22
IRX4P78413 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.4■□□□□ 0.22
IRX4P78413 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX4P78413 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.4■□□□□ 0.22
IRX4P78413 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IRX4P78413 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
IRX4P78413 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
IRX4P78413 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IRX4P78413 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.4■□□□□ 0.22
IRX4P78413 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX4P78413 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX4P78413 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.4■□□□□ 0.22
IRX4P78413 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX4P78413 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
IRX4P78413 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX4P78413 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX4P78413 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
IRX4P78413 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.39■□□□□ 0.22
IRX4P78413 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
IRX4P78413 AL035456.1-201ENST00000456064 1369 ntBASIC16.39■□□□□ 0.21
IRX4P78413 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
IRX4P78413 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.39■□□□□ 0.21
IRX4P78413 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
IRX4P78413 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
IRX4P78413 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
IRX4P78413 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IRX4P78413 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IRX4P78413 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.39■□□□□ 0.21
IRX4P78413 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.39■□□□□ 0.21
IRX4P78413 DGCR5-201ENST00000399539 862 ntBASIC16.39■□□□□ 0.21
IRX4P78413 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms