Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SKP1P63208 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SKP1P63208 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SKP1P63208 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SKP1P63208 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SKP1P63208 AL133267.1-201ENST00000398220 340 ntBASIC14.92□□□□□ -0.02
SKP1P63208 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.92□□□□□ -0.02
SKP1P63208 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.92□□□□□ -0.02
SKP1P63208 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 KRT18P43-201ENST00000469825 1281 ntBASIC14.92□□□□□ -0.02
SKP1P63208 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.92□□□□□ -0.02
SKP1P63208 AC055876.2-201ENST00000531834 546 ntBASIC14.92□□□□□ -0.02
SKP1P63208 TPRX2P-201ENST00000535362 881 ntBASIC14.92□□□□□ -0.02
SKP1P63208 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SKP1P63208 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.92□□□□□ -0.02
SKP1P63208 MIR4313-201ENST00000580760 101 ntBASIC14.92□□□□□ -0.02
SKP1P63208 LINC02560-201ENST00000596379 459 ntBASIC14.92□□□□□ -0.02
SKP1P63208 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.92□□□□□ -0.02
SKP1P63208 AC004840.1-201ENST00000636359 365 ntBASIC14.92□□□□□ -0.02
SKP1P63208 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SKP1P63208 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SKP1P63208 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SKP1P63208 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SKP1P63208 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SKP1P63208 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SKP1P63208 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 LINC02199-201ENST00000506655 2702 ntBASIC14.92□□□□□ -0.02
SKP1P63208 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SKP1P63208 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SKP1P63208 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.92□□□□□ -0.02
SKP1P63208 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SKP1P63208 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.92□□□□□ -0.02
SKP1P63208 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 AL365209.1-201ENST00000624418 6473 ntBASIC14.91□□□□□ -0.02
SKP1P63208 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SKP1P63208 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.91□□□□□ -0.02
SKP1P63208 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SKP1P63208 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.91□□□□□ -0.02
SKP1P63208 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.91□□□□□ -0.02
SKP1P63208 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SKP1P63208 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
SKP1P63208 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.91□□□□□ -0.02
SKP1P63208 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.91□□□□□ -0.02
SKP1P63208 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 AC002472.2-201ENST00000442739 958 ntBASIC14.91□□□□□ -0.02
SKP1P63208 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.91□□□□□ -0.02
SKP1P63208 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.91□□□□□ -0.02
SKP1P63208 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.91□□□□□ -0.02
SKP1P63208 AC027307.3-201ENST00000594262 1100 ntBASIC14.91□□□□□ -0.02
SKP1P63208 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.91□□□□□ -0.02
SKP1P63208 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.91□□□□□ -0.02
SKP1P63208 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.91□□□□□ -0.02
SKP1P63208 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.91□□□□□ -0.02
SKP1P63208 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.91□□□□□ -0.02
SKP1P63208 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SKP1P63208 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.91□□□□□ -0.02
SKP1P63208 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SKP1P63208 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SKP1P63208 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SKP1P63208 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SKP1P63208 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms