Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
UBE2NP61088 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
UBE2NP61088 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 LINC02199-201ENST00000506655 2702 ntBASIC13.83□□□□□ -0.2
UBE2NP61088 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.83□□□□□ -0.2
UBE2NP61088 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.83□□□□□ -0.2
UBE2NP61088 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
UBE2NP61088 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 AC136604.1-201ENST00000418535 575 ntBASIC13.83□□□□□ -0.2
UBE2NP61088 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.83□□□□□ -0.2
UBE2NP61088 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 SERBP1P5-201ENST00000510079 1181 ntBASIC13.83□□□□□ -0.2
UBE2NP61088 SLED1-202ENST00000512051 380 ntBASIC13.83□□□□□ -0.2
UBE2NP61088 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.83□□□□□ -0.2
UBE2NP61088 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.83□□□□□ -0.2
UBE2NP61088 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.83□□□□□ -0.2
UBE2NP61088 RN7SL204P-201ENST00000582831 262 ntBASIC13.83□□□□□ -0.2
UBE2NP61088 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
UBE2NP61088 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.83□□□□□ -0.2
UBE2NP61088 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.83□□□□□ -0.2
UBE2NP61088 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.83□□□□□ -0.2
UBE2NP61088 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
UBE2NP61088 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
UBE2NP61088 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2NP61088 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
UBE2NP61088 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
UBE2NP61088 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2NP61088 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.82□□□□□ -0.2
UBE2NP61088 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
UBE2NP61088 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.82□□□□□ -0.2
UBE2NP61088 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2NP61088 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2NP61088 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.82□□□□□ -0.2
UBE2NP61088 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.82□□□□□ -0.2
UBE2NP61088 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.82□□□□□ -0.2
UBE2NP61088 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.82□□□□□ -0.2
UBE2NP61088 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 SPDYE19P-201ENST00000338590 713 ntBASIC13.82□□□□□ -0.2
UBE2NP61088 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
UBE2NP61088 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 MEP1AP4-201ENST00000423244 1087 ntBASIC13.82□□□□□ -0.2
UBE2NP61088 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2NP61088 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2NP61088 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2NP61088 TPRX2P-201ENST00000535362 881 ntBASIC13.82□□□□□ -0.2
UBE2NP61088 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.82□□□□□ -0.2
UBE2NP61088 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.82□□□□□ -0.2
UBE2NP61088 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2NP61088 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 AL607033.1-201ENST00000623900 1599 ntBASIC13.82□□□□□ -0.2
UBE2NP61088 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.82□□□□□ -0.2
UBE2NP61088 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UBE2NP61088 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
UBE2NP61088 AC092850.2-201ENST00000623821 2697 ntBASIC13.82□□□□□ -0.2
UBE2NP61088 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.82□□□□□ -0.2
UBE2NP61088 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2NP61088 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2NP61088 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms