Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM3BP58499 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.33□□□□□ -0.44
FAM3BP58499 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM3BP58499 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM3BP58499 HSPA7-201ENST00000445535 1927 ntBASIC12.33□□□□□ -0.44
FAM3BP58499 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM3BP58499 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM3BP58499 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.33□□□□□ -0.44
FAM3BP58499 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FAM3BP58499 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 AC092127.1-201ENST00000567093 3455 ntBASIC12.32□□□□□ -0.44
FAM3BP58499 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
FAM3BP58499 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM3BP58499 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.32□□□□□ -0.44
FAM3BP58499 AC011467.2-201ENST00000598425 242 ntBASIC12.32□□□□□ -0.44
FAM3BP58499 AL138831.2-201ENST00000606564 490 ntBASIC12.32□□□□□ -0.44
FAM3BP58499 AL773604.1-201ENST00000617417 272 ntBASIC12.32□□□□□ -0.44
FAM3BP58499 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM3BP58499 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM3BP58499 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM3BP58499 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
FAM3BP58499 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
FAM3BP58499 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 AC132938.5-201ENST00000624980 1813 ntBASIC12.32□□□□□ -0.44
FAM3BP58499 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
FAM3BP58499 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.32□□□□□ -0.44
FAM3BP58499 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM3BP58499 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
FAM3BP58499 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM3BP58499 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.31□□□□□ -0.44
FAM3BP58499 DGCR9-201ENST00000609630 2415 ntBASIC12.31□□□□□ -0.44
FAM3BP58499 COL6A4P2-202ENST00000504443 2753 ntBASIC12.31□□□□□ -0.44
FAM3BP58499 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM3BP58499 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.31□□□□□ -0.44
FAM3BP58499 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.31□□□□□ -0.44
FAM3BP58499 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM3BP58499 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.31□□□□□ -0.44
FAM3BP58499 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
FAM3BP58499 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.31□□□□□ -0.44
FAM3BP58499 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM3BP58499 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
FAM3BP58499 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.31□□□□□ -0.44
FAM3BP58499 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
FAM3BP58499 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM3BP58499 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
FAM3BP58499 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM3BP58499 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.31□□□□□ -0.44
FAM3BP58499 KLF4P1-201ENST00000412782 1185 ntBASIC12.31□□□□□ -0.44
FAM3BP58499 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.31□□□□□ -0.44
FAM3BP58499 AC079781.3-201ENST00000449110 356 ntBASIC12.31□□□□□ -0.44
FAM3BP58499 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
FAM3BP58499 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.31□□□□□ -0.44
FAM3BP58499 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.31□□□□□ -0.44
FAM3BP58499 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
FAM3BP58499 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
FAM3BP58499 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM3BP58499 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM3BP58499 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM3BP58499 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM3BP58499 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.31□□□□□ -0.44
FAM3BP58499 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM3BP58499 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.31□□□□□ -0.44
FAM3BP58499 AL356585.2-201ENST00000625078 2396 ntBASIC12.31□□□□□ -0.44
FAM3BP58499 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms