Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXG1P55316 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
FOXG1P55316 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
FOXG1P55316 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXG1P55316 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.7□□□□□ -0.22
FOXG1P55316 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.7□□□□□ -0.22
FOXG1P55316 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.7□□□□□ -0.22
FOXG1P55316 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.7□□□□□ -0.22
FOXG1P55316 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.7□□□□□ -0.22
FOXG1P55316 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
FOXG1P55316 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.7□□□□□ -0.22
FOXG1P55316 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
FOXG1P55316 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.7□□□□□ -0.22
FOXG1P55316 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.7□□□□□ -0.22
FOXG1P55316 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.7□□□□□ -0.22
FOXG1P55316 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.7□□□□□ -0.22
FOXG1P55316 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.7□□□□□ -0.22
FOXG1P55316 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.7□□□□□ -0.22
FOXG1P55316 AC005225.4-201ENST00000557330 545 ntBASIC13.7□□□□□ -0.22
FOXG1P55316 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.7□□□□□ -0.22
FOXG1P55316 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.7□□□□□ -0.22
FOXG1P55316 AL359711.2-201ENST00000563105 872 ntBASIC13.7□□□□□ -0.22
FOXG1P55316 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.7□□□□□ -0.22
FOXG1P55316 BRI3BPP1-201ENST00000594224 787 ntBASIC13.7□□□□□ -0.22
FOXG1P55316 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.7□□□□□ -0.22
FOXG1P55316 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.7□□□□□ -0.22
FOXG1P55316 AL049840.4-201ENST00000602422 811 ntBASIC13.7□□□□□ -0.22
FOXG1P55316 AC012645.4-201ENST00000610691 1061 ntBASIC13.7□□□□□ -0.22
FOXG1P55316 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
FOXG1P55316 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.7□□□□□ -0.22
FOXG1P55316 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.7□□□□□ -0.22
FOXG1P55316 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
FOXG1P55316 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
FOXG1P55316 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.7□□□□□ -0.22
FOXG1P55316 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.7□□□□□ -0.22
FOXG1P55316 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
FOXG1P55316 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
FOXG1P55316 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
FOXG1P55316 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
FOXG1P55316 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXG1P55316 AC020658.6-201ENST00000623564 1870 ntBASIC13.7□□□□□ -0.22
FOXG1P55316 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
FOXG1P55316 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.69□□□□□ -0.22
FOXG1P55316 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.69□□□□□ -0.22
FOXG1P55316 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
FOXG1P55316 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
FOXG1P55316 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.69□□□□□ -0.22
FOXG1P55316 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
FOXG1P55316 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
FOXG1P55316 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.69□□□□□ -0.22
FOXG1P55316 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.69□□□□□ -0.22
FOXG1P55316 COX5BP8-201ENST00000416911 349 ntBASIC13.69□□□□□ -0.22
FOXG1P55316 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
FOXG1P55316 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.69□□□□□ -0.22
FOXG1P55316 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.69□□□□□ -0.22
FOXG1P55316 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
FOXG1P55316 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.69□□□□□ -0.22
FOXG1P55316 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.69□□□□□ -0.22
FOXG1P55316 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.69□□□□□ -0.22
FOXG1P55316 AC027307.3-201ENST00000594262 1100 ntBASIC13.69□□□□□ -0.22
FOXG1P55316 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
FOXG1P55316 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.69□□□□□ -0.22
FOXG1P55316 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.69□□□□□ -0.22
FOXG1P55316 AC084364.1-201ENST00000551967 1556 ntBASIC13.69□□□□□ -0.22
FOXG1P55316 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.69□□□□□ -0.22
FOXG1P55316 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.69□□□□□ -0.22
FOXG1P55316 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.69□□□□□ -0.22
FOXG1P55316 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
FOXG1P55316 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FOXG1P55316 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms