Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 PRAL-201ENST00000624952 3286 ntBASIC16.63■□□□□ 0.25
CACNA2D1P54289 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 MEP1AP4-201ENST00000423244 1087 ntBASIC16.62■□□□□ 0.25
CACNA2D1P54289 AC005034.1-201ENST00000426657 489 ntBASIC16.62■□□□□ 0.25
CACNA2D1P54289 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 AC093726.1-201ENST00000608064 963 ntBASIC16.62■□□□□ 0.25
CACNA2D1P54289 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 AL035252.4-201ENST00000624174 288 ntBASIC16.62■□□□□ 0.25
CACNA2D1P54289 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNA2D1P54289 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.62■□□□□ 0.25
CACNA2D1P54289 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 NME2P1-201ENST00000426182 414 ntBASIC16.61■□□□□ 0.25
CACNA2D1P54289 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 RN7SL399P-201ENST00000471648 279 ntBASIC16.61■□□□□ 0.25
CACNA2D1P54289 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 AC027307.3-201ENST00000594262 1100 ntBASIC16.61■□□□□ 0.25
CACNA2D1P54289 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CACNA2D1P54289 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNA2D1P54289 AL365203.3-201ENST00000609742 2057 ntBASIC16.61■□□□□ 0.25
CACNA2D1P54289 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms