Protein–RNA interactions for Protein: P53677

AP3M2, AP-3 complex subunit mu-2, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2P53677 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3M2P53677 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3M2P53677 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.81■□□□□ 0.28
AP3M2P53677 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3M2P53677 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
AP3M2P53677 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP3M2P53677 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP3M2P53677 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3M2P53677 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.81■□□□□ 0.28
AP3M2P53677 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP3M2P53677 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
AP3M2P53677 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
AP3M2P53677 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.8■□□□□ 0.28
AP3M2P53677 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP3M2P53677 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3M2P53677 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3M2P53677 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.8■□□□□ 0.28
AP3M2P53677 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3M2P53677 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.8■□□□□ 0.28
AP3M2P53677 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.8■□□□□ 0.28
AP3M2P53677 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3M2P53677 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3M2P53677 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.8■□□□□ 0.28
AP3M2P53677 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.8■□□□□ 0.28
AP3M2P53677 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.8■□□□□ 0.28
AP3M2P53677 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3M2P53677 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.8■□□□□ 0.28
AP3M2P53677 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3M2P53677 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP3M2P53677 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
AP3M2P53677 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.8■□□□□ 0.28
AP3M2P53677 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.8■□□□□ 0.28
AP3M2P53677 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP3M2P53677 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
AP3M2P53677 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3M2P53677 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3M2P53677 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.8■□□□□ 0.28
AP3M2P53677 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 AC126365.1-201ENST00000578585 1514 ntBASIC16.8■□□□□ 0.28
AP3M2P53677 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3M2P53677 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP3M2P53677 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.79■□□□□ 0.28
AP3M2P53677 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3M2P53677 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3M2P53677 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP3M2P53677 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3M2P53677 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
AP3M2P53677 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP3M2P53677 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.79■□□□□ 0.28
AP3M2P53677 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3M2P53677 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3M2P53677 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3M2P53677 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3M2P53677 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3M2P53677 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP3M2P53677 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.79■□□□□ 0.28
AP3M2P53677 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3M2P53677 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3M2P53677 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
AP3M2P53677 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3M2P53677 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3M2P53677 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3M2P53677 AC068587.6-202ENST00000641839 5619 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms