Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.12■□□□□ 0.33
BRCA2P51587 AP002490.2-201ENST00000524791 560 ntBASIC17.12■□□□□ 0.33
BRCA2P51587 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.12■□□□□ 0.33
BRCA2P51587 AL023803.2-201ENST00000620080 638 ntBASIC17.12■□□□□ 0.33
BRCA2P51587 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.12■□□□□ 0.33
BRCA2P51587 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BRCA2P51587 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.12■□□□□ 0.33
BRCA2P51587 MIR6858-201ENST00000620733 67 ntBASIC17.12■□□□□ 0.33
BRCA2P51587 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
BRCA2P51587 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
BRCA2P51587 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
BRCA2P51587 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.12■□□□□ 0.33
BRCA2P51587 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BRCA2P51587 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 RPS9P1-201ENST00000419943 583 ntBASIC17.11■□□□□ 0.33
BRCA2P51587 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC17.11■□□□□ 0.33
BRCA2P51587 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.11■□□□□ 0.33
BRCA2P51587 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.11■□□□□ 0.33
BRCA2P51587 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.11■□□□□ 0.33
BRCA2P51587 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BRCA2P51587 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.11■□□□□ 0.33
BRCA2P51587 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.11■□□□□ 0.33
BRCA2P51587 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BRCA2P51587 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.11■□□□□ 0.33
BRCA2P51587 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 OR2K2-202ENST00000374428 1038 ntBASIC17.11■□□□□ 0.33
BRCA2P51587 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.11■□□□□ 0.33
BRCA2P51587 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.11■□□□□ 0.33
BRCA2P51587 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.11■□□□□ 0.33
BRCA2P51587 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.11■□□□□ 0.33
BRCA2P51587 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
BRCA2P51587 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BRCA2P51587 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BRCA2P51587 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BRCA2P51587 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BRCA2P51587 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.11■□□□□ 0.33
BRCA2P51587 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
BRCA2P51587 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCA2P51587 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.11■□□□□ 0.33
BRCA2P51587 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.11■□□□□ 0.33
BRCA2P51587 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC17.11■□□□□ 0.33
BRCA2P51587 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.11■□□□□ 0.33
BRCA2P51587 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCA2P51587 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCA2P51587 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCA2P51587 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.1■□□□□ 0.33
BRCA2P51587 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.1■□□□□ 0.33
BRCA2P51587 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
BRCA2P51587 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.1■□□□□ 0.33
BRCA2P51587 AL450472.2-201ENST00000603663 1156 ntBASIC17.1■□□□□ 0.33
BRCA2P51587 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCA2P51587 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCA2P51587 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCA2P51587 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.1■□□□□ 0.33
BRCA2P51587 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.1■□□□□ 0.33
BRCA2P51587 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCA2P51587 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.1■□□□□ 0.33
BRCA2P51587 REXO1L5P-201ENST00000622260 2098 ntBASIC17.1■□□□□ 0.33
BRCA2P51587 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCA2P51587 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.1■□□□□ 0.33
BRCA2P51587 AC009779.1-201ENST00000551138 283 ntBASIC17.1■□□□□ 0.33
BRCA2P51587 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.1■□□□□ 0.33
BRCA2P51587 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BRCA2P51587 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCA2P51587 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.1■□□□□ 0.33
BRCA2P51587 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCA2P51587 AP001282.1-201ENST00000531301 1499 ntBASIC17.1■□□□□ 0.33
BRCA2P51587 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCA2P51587 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCA2P51587 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.09■□□□□ 0.33
BRCA2P51587 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRCA2P51587 AC092127.1-201ENST00000567093 3455 ntBASIC17.09■□□□□ 0.33
BRCA2P51587 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms