Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
RNF144AP50876 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.07
RNF144AP50876 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
RNF144AP50876 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
RNF144AP50876 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF144AP50876 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF144AP50876 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF144AP50876 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RNF144AP50876 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RNF144AP50876 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RNF144AP50876 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF144AP50876 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF144AP50876 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.64□□□□□ -0.07
RNF144AP50876 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF144AP50876 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF144AP50876 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RNF144AP50876 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.64□□□□□ -0.07
RNF144AP50876 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.64□□□□□ -0.07
RNF144AP50876 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF144AP50876 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.64□□□□□ -0.07
RNF144AP50876 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF144AP50876 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF144AP50876 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.64□□□□□ -0.07
RNF144AP50876 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF144AP50876 AL450472.2-201ENST00000603663 1156 ntBASIC14.64□□□□□ -0.07
RNF144AP50876 AL589739.1-201ENST00000607720 493 ntBASIC14.64□□□□□ -0.07
RNF144AP50876 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RNF144AP50876 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF144AP50876 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.64□□□□□ -0.07
RNF144AP50876 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF144AP50876 TNRC18P2-201ENST00000417666 2714 ntBASIC14.64□□□□□ -0.07
RNF144AP50876 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF144AP50876 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RNF144AP50876 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF144AP50876 MIR600HG-201ENST00000449175 5984 ntBASIC14.63□□□□□ -0.07
RNF144AP50876 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF144AP50876 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF144AP50876 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF144AP50876 LINC02228-204ENST00000642115 2962 ntBASIC14.63□□□□□ -0.07
RNF144AP50876 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF144AP50876 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF144AP50876 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF144AP50876 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF144AP50876 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF144AP50876 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF144AP50876 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RNF144AP50876 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF144AP50876 AC007967.4-201ENST00000614700 386 ntBASIC14.63□□□□□ -0.07
RNF144AP50876 SPDYE12P-201ENST00000618416 771 ntBASIC14.63□□□□□ -0.07
RNF144AP50876 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RNF144AP50876 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.63□□□□□ -0.07
RNF144AP50876 AC079781.4-201ENST00000641908 219 ntBASIC14.63□□□□□ -0.07
RNF144AP50876 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF144AP50876 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF144AP50876 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RNF144AP50876 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms