Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CPT1AP50416 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.21■□□□□ 0.35
CPT1AP50416 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 AL139094.1-201ENST00000405549 1188 ntBASIC17.21■□□□□ 0.35
CPT1AP50416 CALR4P-201ENST00000431943 946 ntBASIC17.21■□□□□ 0.35
CPT1AP50416 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.21■□□□□ 0.35
CPT1AP50416 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.21■□□□□ 0.35
CPT1AP50416 AC004898.1-201ENST00000451057 766 ntBASIC17.21■□□□□ 0.35
CPT1AP50416 RPSAP36-202ENST00000494591 1261 ntBASIC17.21■□□□□ 0.35
CPT1AP50416 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.21■□□□□ 0.35
CPT1AP50416 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.21■□□□□ 0.35
CPT1AP50416 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.21■□□□□ 0.35
CPT1AP50416 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CPT1AP50416 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CPT1AP50416 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPT1AP50416 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.21■□□□□ 0.34
CPT1AP50416 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.21■□□□□ 0.34
CPT1AP50416 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CPT1AP50416 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CPT1AP50416 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CPT1AP50416 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CPT1AP50416 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CPT1AP50416 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.2■□□□□ 0.34
CPT1AP50416 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.2■□□□□ 0.34
CPT1AP50416 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.2■□□□□ 0.34
CPT1AP50416 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CPT1AP50416 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.2■□□□□ 0.34
CPT1AP50416 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.2■□□□□ 0.34
CPT1AP50416 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.2■□□□□ 0.34
CPT1AP50416 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.2■□□□□ 0.34
CPT1AP50416 AP006547.1-201ENST00000563435 692 ntBASIC17.2■□□□□ 0.34
CPT1AP50416 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.2■□□□□ 0.34
CPT1AP50416 AC104982.3-201ENST00000581995 514 ntBASIC17.2■□□□□ 0.34
CPT1AP50416 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.2■□□□□ 0.34
CPT1AP50416 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.2■□□□□ 0.34
CPT1AP50416 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CPT1AP50416 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.2■□□□□ 0.34
CPT1AP50416 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CPT1AP50416 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.2■□□□□ 0.34
CPT1AP50416 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPT1AP50416 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CPT1AP50416 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CPT1AP50416 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CPT1AP50416 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.19■□□□□ 0.34
CPT1AP50416 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.19■□□□□ 0.34
CPT1AP50416 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.19■□□□□ 0.34
CPT1AP50416 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.19■□□□□ 0.34
CPT1AP50416 CNN2P10-201ENST00000443067 918 ntBASIC17.19■□□□□ 0.34
CPT1AP50416 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.19■□□□□ 0.34
CPT1AP50416 LINC02447-202ENST00000501888 2146 ntBASIC17.19■□□□□ 0.34
CPT1AP50416 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.19■□□□□ 0.34
CPT1AP50416 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CPT1AP50416 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CPT1AP50416 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CPT1AP50416 ENPP7P14-201ENST00000621765 1040 ntBASIC17.19■□□□□ 0.34
CPT1AP50416 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.19■□□□□ 0.34
CPT1AP50416 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.19■□□□□ 0.34
CPT1AP50416 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.19■□□□□ 0.34
CPT1AP50416 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CPT1AP50416 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms