Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
SLC1A6P48664 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC1A6P48664 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SLC1A6P48664 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 MIR1224-201ENST00000408193 85 ntBASIC15.46■□□□□ 0.07
SLC1A6P48664 RNA5SP410-201ENST00000516285 106 ntBASIC15.46■□□□□ 0.07
SLC1A6P48664 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC1A6P48664 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.46■□□□□ 0.07
SLC1A6P48664 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 AC018845.2-201ENST00000568326 409 ntBASIC15.46■□□□□ 0.07
SLC1A6P48664 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.46■□□□□ 0.07
SLC1A6P48664 AC097359.3-201ENST00000603982 1210 ntBASIC15.46■□□□□ 0.07
SLC1A6P48664 AC068137.2-201ENST00000605408 478 ntBASIC15.46■□□□□ 0.07
SLC1A6P48664 AL691432.3-201ENST00000621860 400 ntBASIC15.46■□□□□ 0.07
SLC1A6P48664 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC1A6P48664 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC1A6P48664 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC1A6P48664 WASH3P-207ENST00000560956 1394 ntBASIC15.46■□□□□ 0.07
SLC1A6P48664 FO538757.1-201ENST00000623083 1397 ntBASIC15.46■□□□□ 0.07
SLC1A6P48664 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC1A6P48664 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SLC1A6P48664 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC1A6P48664 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
SLC1A6P48664 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC1A6P48664 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC1A6P48664 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC1A6P48664 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC1A6P48664 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.46■□□□□ 0.06
SLC1A6P48664 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.46■□□□□ 0.06
SLC1A6P48664 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
SLC1A6P48664 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.46■□□□□ 0.06
SLC1A6P48664 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.46■□□□□ 0.06
SLC1A6P48664 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 CYP4F24P-201ENST00000586049 1580 ntBASIC15.45■□□□□ 0.06
SLC1A6P48664 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC1A6P48664 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
SLC1A6P48664 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC1A6P48664 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC1A6P48664 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC1A6P48664 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SLC1A6P48664 AC002056.1-201ENST00000395613 760 ntBASIC15.45■□□□□ 0.06
SLC1A6P48664 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
SLC1A6P48664 FAM8A3P-201ENST00000427218 844 ntBASIC15.45■□□□□ 0.06
SLC1A6P48664 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 AC079776.4-201ENST00000511039 504 ntBASIC15.45■□□□□ 0.06
SLC1A6P48664 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC1A6P48664 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC1A6P48664 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.45■□□□□ 0.06
SLC1A6P48664 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC1A6P48664 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC1A6P48664 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.45■□□□□ 0.06
SLC1A6P48664 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
SLC1A6P48664 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC1A6P48664 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SLC1A6P48664 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC1A6P48664 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC1A6P48664 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SLC1A6P48664 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC1A6P48664 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC1A6P48664 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC1A6P48664 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms