Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC005829.1-201ENST00000570002 483 ntBASIC16.78■□□□□ 0.28
SSR1P43307 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
SSR1P43307 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.78■□□□□ 0.28
SSR1P43307 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SSR1P43307 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SSR1P43307 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.77■□□□□ 0.28
SSR1P43307 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.77■□□□□ 0.28
SSR1P43307 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 REXO1L1P-202ENST00000608646 1974 ntBASIC16.77■□□□□ 0.28
SSR1P43307 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SSR1P43307 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.77■□□□□ 0.28
SSR1P43307 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.77■□□□□ 0.28
SSR1P43307 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SSR1P43307 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 AL136982.4-201ENST00000437689 1740 ntBASIC16.77■□□□□ 0.28
SSR1P43307 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SSR1P43307 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SSR1P43307 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 MIR346-201ENST00000362234 95 ntBASIC16.77■□□□□ 0.28
SSR1P43307 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.77■□□□□ 0.28
SSR1P43307 AP000347.1-202ENST00000435868 847 ntBASIC16.77■□□□□ 0.28
SSR1P43307 AC069335.1-201ENST00000489972 472 ntBASIC16.77■□□□□ 0.28
SSR1P43307 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.77■□□□□ 0.28
SSR1P43307 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.77■□□□□ 0.28
SSR1P43307 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSR1P43307 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSR1P43307 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSR1P43307 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSR1P43307 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.77■□□□□ 0.27
SSR1P43307 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSR1P43307 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSR1P43307 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSR1P43307 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SSR1P43307 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SSR1P43307 AP3S2-216ENST00000617003 1561 ntBASIC16.77■□□□□ 0.27
SSR1P43307 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 ELL2P1-201ENST00000413990 1906 ntBASIC16.76■□□□□ 0.27
SSR1P43307 AC067750.1-201ENST00000608826 6545 ntBASIC16.76■□□□□ 0.27
SSR1P43307 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SSR1P43307 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SSR1P43307 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SSR1P43307 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.76■□□□□ 0.27
SSR1P43307 AC020658.6-201ENST00000623564 1870 ntBASIC16.76■□□□□ 0.27
SSR1P43307 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SSR1P43307 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.76■□□□□ 0.27
SSR1P43307 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SSR1P43307 DNAJB3-201ENST00000446806 729 ntBASIC16.76■□□□□ 0.27
SSR1P43307 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.76■□□□□ 0.27
SSR1P43307 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.76■□□□□ 0.27
SSR1P43307 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.76■□□□□ 0.27
SSR1P43307 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.76■□□□□ 0.27
SSR1P43307 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.76■□□□□ 0.27
SSR1P43307 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.76■□□□□ 0.27
SSR1P43307 AL671883.3-201ENST00000603274 991 ntBASIC16.76■□□□□ 0.27
SSR1P43307 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SSR1P43307 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.76■□□□□ 0.27
SSR1P43307 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SSR1P43307 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSR1P43307 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.76■□□□□ 0.27
SSR1P43307 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms