Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CKS2P33552 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.61□□□□□ -0.55
CKS2P33552 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
CKS2P33552 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 AC041040.2-201ENST00000622926 2899 ntBASIC11.61□□□□□ -0.55
CKS2P33552 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.61□□□□□ -0.55
CKS2P33552 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CKS2P33552 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CKS2P33552 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS2P33552 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CKS2P33552 AC079781.5-202ENST00000641784 3743 ntBASIC11.6□□□□□ -0.55
CKS2P33552 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS2P33552 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS2P33552 AC005521.1-201ENST00000393351 872 ntBASIC11.6□□□□□ -0.55
CKS2P33552 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.6□□□□□ -0.55
CKS2P33552 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.6□□□□□ -0.55
CKS2P33552 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS2P33552 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 TOB2P1-201ENST00000469761 992 ntBASIC11.6□□□□□ -0.55
CKS2P33552 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS2P33552 AC074051.2-201ENST00000565115 352 ntBASIC11.6□□□□□ -0.55
CKS2P33552 MIR5100-201ENST00000579544 119 ntBASIC11.6□□□□□ -0.55
CKS2P33552 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 AC006011.2-201ENST00000621313 1158 ntBASIC11.6□□□□□ -0.55
CKS2P33552 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 ZBED1P1-201ENST00000502364 1930 ntBASIC11.6□□□□□ -0.55
CKS2P33552 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CKS2P33552 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS2P33552 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 AC134407.2-201ENST00000625089 1978 ntBASIC11.59□□□□□ -0.55
CKS2P33552 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS2P33552 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 AC006504.5-208ENST00000588784 2401 ntBASIC11.59□□□□□ -0.55
CKS2P33552 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS2P33552 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 AC016734.2-201ENST00000624325 1377 ntBASIC11.59□□□□□ -0.55
CKS2P33552 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS2P33552 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS2P33552 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms