Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.31■□□□□ 0.04
EPHA3P29320 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.31■□□□□ 0.04
EPHA3P29320 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.31■□□□□ 0.04
EPHA3P29320 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.31■□□□□ 0.04
EPHA3P29320 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.31■□□□□ 0.04
EPHA3P29320 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.31■□□□□ 0.04
EPHA3P29320 RN7SL510P-201ENST00000581311 263 ntBASIC15.31■□□□□ 0.04
EPHA3P29320 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 Z83851.2-201ENST00000609564 659 ntBASIC15.31■□□□□ 0.04
EPHA3P29320 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.31■□□□□ 0.04
EPHA3P29320 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.31■□□□□ 0.04
EPHA3P29320 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
EPHA3P29320 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
EPHA3P29320 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.31■□□□□ 0.04
EPHA3P29320 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.31■□□□□ 0.04
EPHA3P29320 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.3■□□□□ 0.04
EPHA3P29320 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
EPHA3P29320 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.3■□□□□ 0.04
EPHA3P29320 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 AC002056.1-201ENST00000395613 760 ntBASIC15.3■□□□□ 0.04
EPHA3P29320 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.3■□□□□ 0.04
EPHA3P29320 MRPL3P1-201ENST00000400109 1033 ntBASIC15.3■□□□□ 0.04
EPHA3P29320 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
EPHA3P29320 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 KRT8P37-201ENST00000451609 1420 ntBASIC15.3■□□□□ 0.04
EPHA3P29320 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 PHKG1P2-201ENST00000457537 863 ntBASIC15.3■□□□□ 0.04
EPHA3P29320 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.3■□□□□ 0.04
EPHA3P29320 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.3■□□□□ 0.04
EPHA3P29320 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
EPHA3P29320 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
EPHA3P29320 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.3■□□□□ 0.04
EPHA3P29320 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.3■□□□□ 0.04
EPHA3P29320 AP002472.1-201ENST00000577490 586 ntBASIC15.3■□□□□ 0.04
EPHA3P29320 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 CYP4F24P-201ENST00000586049 1580 ntBASIC15.3■□□□□ 0.04
EPHA3P29320 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.04
EPHA3P29320 AC104692.2-201ENST00000603054 253 ntBASIC15.3■□□□□ 0.04
EPHA3P29320 AC099522.2-201ENST00000607001 744 ntBASIC15.3■□□□□ 0.04
EPHA3P29320 AC064836.3-201ENST00000607928 673 ntBASIC15.3■□□□□ 0.04
EPHA3P29320 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.3■□□□□ 0.04
EPHA3P29320 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
EPHA3P29320 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.3■□□□□ 0.04
EPHA3P29320 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
EPHA3P29320 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
EPHA3P29320 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
EPHA3P29320 AL365209.1-201ENST00000624418 6473 ntBASIC15.3■□□□□ 0.04
EPHA3P29320 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHA3P29320 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
EPHA3P29320 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
EPHA3P29320 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.3■□□□□ 0.04
EPHA3P29320 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
EPHA3P29320 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 GRK6P1-201ENST00000400595 1711 ntBASIC15.29■□□□□ 0.04
EPHA3P29320 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
EPHA3P29320 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EPHA3P29320 CICP14-201ENST00000629111 2732 ntBASIC15.29■□□□□ 0.04
EPHA3P29320 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA3P29320 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms