Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.47□□□□□ -0.25
TNFSF4P23510 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 AC112504.1-201ENST00000623415 1841 ntBASIC13.47□□□□□ -0.25
TNFSF4P23510 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.47□□□□□ -0.25
TNFSF4P23510 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TNFSF4P23510 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
TNFSF4P23510 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.47□□□□□ -0.25
TNFSF4P23510 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.47□□□□□ -0.25
TNFSF4P23510 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TNFSF4P23510 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.47□□□□□ -0.25
TNFSF4P23510 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.47□□□□□ -0.25
TNFSF4P23510 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.46□□□□□ -0.25
TNFSF4P23510 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.46□□□□□ -0.25
TNFSF4P23510 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
TNFSF4P23510 Z97205.2-201ENST00000564697 1639 ntBASIC13.46□□□□□ -0.25
TNFSF4P23510 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.46□□□□□ -0.25
TNFSF4P23510 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.46□□□□□ -0.25
TNFSF4P23510 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.46□□□□□ -0.25
TNFSF4P23510 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.46□□□□□ -0.25
TNFSF4P23510 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.46□□□□□ -0.25
TNFSF4P23510 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.46□□□□□ -0.25
TNFSF4P23510 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TNFSF4P23510 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 AC136604.1-201ENST00000418535 575 ntBASIC13.46□□□□□ -0.25
TNFSF4P23510 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.46□□□□□ -0.25
TNFSF4P23510 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.46□□□□□ -0.25
TNFSF4P23510 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.46□□□□□ -0.25
TNFSF4P23510 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.46□□□□□ -0.25
TNFSF4P23510 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.46□□□□□ -0.25
TNFSF4P23510 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.46□□□□□ -0.25
TNFSF4P23510 MIR4745-201ENST00000577608 62 ntBASIC13.46□□□□□ -0.25
TNFSF4P23510 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TNFSF4P23510 AC004233.3-201ENST00000607794 1269 ntBASIC13.46□□□□□ -0.25
TNFSF4P23510 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.46□□□□□ -0.25
TNFSF4P23510 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TNFSF4P23510 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.46□□□□□ -0.25
TNFSF4P23510 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.46□□□□□ -0.25
TNFSF4P23510 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TNFSF4P23510 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TNFSF4P23510 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.46□□□□□ -0.25
TNFSF4P23510 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TNFSF4P23510 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.46□□□□□ -0.26
TNFSF4P23510 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TNFSF4P23510 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.46□□□□□ -0.26
TNFSF4P23510 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TNFSF4P23510 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TNFSF4P23510 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TNFSF4P23510 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.46□□□□□ -0.26
TNFSF4P23510 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.46□□□□□ -0.26
TNFSF4P23510 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
TNFSF4P23510 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TNFSF4P23510 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TNFSF4P23510 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TNFSF4P23510 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TNFSF4P23510 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TNFSF4P23510 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TNFSF4P23510 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TNFSF4P23510 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TNFSF4P23510 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TNFSF4P23510 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
TNFSF4P23510 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TNFSF4P23510 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.45□□□□□ -0.26
TNFSF4P23510 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TNFSF4P23510 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TNFSF4P23510 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.45□□□□□ -0.26
TNFSF4P23510 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TNFSF4P23510 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.45□□□□□ -0.26
TNFSF4P23510 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.45□□□□□ -0.26
TNFSF4P23510 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.45□□□□□ -0.26
TNFSF4P23510 MEP1AP4-201ENST00000423244 1087 ntBASIC13.45□□□□□ -0.26
TNFSF4P23510 AC114501.2-201ENST00000439631 535 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms