Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.8■□□□□ 0.6
LMNB1P20700 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 KRT8P4-201ENST00000509735 1454 ntBASIC18.8■□□□□ 0.6
LMNB1P20700 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LMNB1P20700 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.8■□□□□ 0.6
LMNB1P20700 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.8■□□□□ 0.6
LMNB1P20700 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.8■□□□□ 0.6
LMNB1P20700 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.8■□□□□ 0.6
LMNB1P20700 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.8■□□□□ 0.6
LMNB1P20700 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.8■□□□□ 0.6
LMNB1P20700 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.8■□□□□ 0.6
LMNB1P20700 RN7SL181P-201ENST00000462921 277 ntBASIC18.8■□□□□ 0.6
LMNB1P20700 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.8■□□□□ 0.6
LMNB1P20700 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.8■□□□□ 0.6
LMNB1P20700 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.8■□□□□ 0.6
LMNB1P20700 OR10B1P-201ENST00000601666 907 ntBASIC18.8■□□□□ 0.6
LMNB1P20700 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.8■□□□□ 0.6
LMNB1P20700 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
LMNB1P20700 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LMNB1P20700 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.8■□□□□ 0.6
LMNB1P20700 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LMNB1P20700 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LMNB1P20700 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.8■□□□□ 0.6
LMNB1P20700 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.79■□□□□ 0.6
LMNB1P20700 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LMNB1P20700 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNB1P20700 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNB1P20700 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LMNB1P20700 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LMNB1P20700 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.79■□□□□ 0.6
LMNB1P20700 AC026316.1-201ENST00000398900 414 ntBASIC18.79■□□□□ 0.6
LMNB1P20700 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.79■□□□□ 0.6
LMNB1P20700 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.79■□□□□ 0.6
LMNB1P20700 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNB1P20700 RPL13AP19-201ENST00000434320 584 ntBASIC18.79■□□□□ 0.6
LMNB1P20700 FGFR3P1-201ENST00000449999 601 ntBASIC18.79■□□□□ 0.6
LMNB1P20700 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 AC100850.1-201ENST00000506768 649 ntBASIC18.79■□□□□ 0.6
LMNB1P20700 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.79■□□□□ 0.6
LMNB1P20700 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNB1P20700 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.79■□□□□ 0.6
LMNB1P20700 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.79■□□□□ 0.6
LMNB1P20700 AC135983.4-201ENST00000564116 1262 ntBASIC18.79■□□□□ 0.6
LMNB1P20700 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.79■□□□□ 0.6
LMNB1P20700 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.79■□□□□ 0.6
LMNB1P20700 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.79■□□□□ 0.6
LMNB1P20700 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.79■□□□□ 0.6
LMNB1P20700 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNB1P20700 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNB1P20700 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LMNB1P20700 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
LMNB1P20700 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.78■□□□□ 0.6
LMNB1P20700 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMNB1P20700 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMNB1P20700 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.78■□□□□ 0.6
LMNB1P20700 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMNB1P20700 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.78■□□□□ 0.6
LMNB1P20700 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMNB1P20700 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNB1P20700 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMNB1P20700 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
LMNB1P20700 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.78■□□□□ 0.6
LMNB1P20700 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNB1P20700 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNB1P20700 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNB1P20700 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNB1P20700 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.78■□□□□ 0.6
LMNB1P20700 CEP164P1-201ENST00000455142 418 ntBASIC18.78■□□□□ 0.6
LMNB1P20700 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.78■□□□□ 0.6
LMNB1P20700 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.78■□□□□ 0.6
LMNB1P20700 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.78■□□□□ 0.6
LMNB1P20700 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
LMNB1P20700 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMNB1P20700 AC020922.3-201ENST00000595064 547 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms