Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.85■□□□□ 0.29
CD58P19256 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD58P19256 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD58P19256 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD58P19256 AC105250.1-201ENST00000509378 2057 ntBASIC16.85■□□□□ 0.29
CD58P19256 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.85■□□□□ 0.29
CD58P19256 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD58P19256 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD58P19256 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD58P19256 AC126177.1-201ENST00000547829 2218 ntBASIC16.85■□□□□ 0.29
CD58P19256 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD58P19256 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CD58P19256 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CD58P19256 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.85■□□□□ 0.29
CD58P19256 AC136621.1-201ENST00000624017 2304 ntBASIC16.85■□□□□ 0.29
CD58P19256 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.85■□□□□ 0.29
CD58P19256 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD58P19256 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.84■□□□□ 0.29
CD58P19256 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.84■□□□□ 0.29
CD58P19256 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 AC104640.1-201ENST00000562617 2109 ntBASIC16.84■□□□□ 0.29
CD58P19256 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 AC013268.4-201ENST00000637413 2228 ntBASIC16.84■□□□□ 0.29
CD58P19256 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.84■□□□□ 0.29
CD58P19256 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.84■□□□□ 0.29
CD58P19256 AC067930.6-201ENST00000623257 4947 ntBASIC16.84■□□□□ 0.29
CD58P19256 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CD58P19256 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CD58P19256 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CD58P19256 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CD58P19256 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.84■□□□□ 0.29
CD58P19256 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.84■□□□□ 0.29
CD58P19256 AJ011932.1-201ENST00000621707 465 ntBASIC16.84■□□□□ 0.29
CD58P19256 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.84■□□□□ 0.29
CD58P19256 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.84■□□□□ 0.29
CD58P19256 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 BTBD7P1-201ENST00000447253 1453 ntBASIC16.84■□□□□ 0.29
CD58P19256 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.84■□□□□ 0.29
CD58P19256 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 AC063926.3-201ENST00000624734 5658 ntBASIC16.84■□□□□ 0.29
CD58P19256 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD58P19256 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.84■□□□□ 0.29
CD58P19256 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.84■□□□□ 0.29
CD58P19256 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
CD58P19256 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CD58P19256 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.83■□□□□ 0.29
CD58P19256 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.83■□□□□ 0.28
CD58P19256 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
CD58P19256 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CD58P19256 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CD58P19256 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.83■□□□□ 0.28
CD58P19256 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.83■□□□□ 0.28
CD58P19256 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.83■□□□□ 0.28
CD58P19256 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CD58P19256 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
CD58P19256 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.83■□□□□ 0.28
CD58P19256 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms