Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CDH1P12830 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH1P12830 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH1P12830 AC092580.3-201ENST00000430932 139 ntBASIC15.33■□□□□ 0.04
CDH1P12830 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH1P12830 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.33■□□□□ 0.04
CDH1P12830 AC027369.6-201ENST00000525520 931 ntBASIC15.33■□□□□ 0.04
CDH1P12830 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 HNRNPUP1-201ENST00000554987 333 ntBASIC15.33■□□□□ 0.04
CDH1P12830 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH1P12830 MIR4313-201ENST00000580760 101 ntBASIC15.33■□□□□ 0.04
CDH1P12830 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH1P12830 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CDH1P12830 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH1P12830 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH1P12830 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH1P12830 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH1P12830 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH1P12830 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH1P12830 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH1P12830 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH1P12830 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH1P12830 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH1P12830 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH1P12830 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH1P12830 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH1P12830 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH1P12830 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH1P12830 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CDH1P12830 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH1P12830 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH1P12830 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 FO393414.2-201ENST00000405153 598 ntBASIC15.32■□□□□ 0.04
CDH1P12830 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.32■□□□□ 0.04
CDH1P12830 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH1P12830 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 SERBP1P3-201ENST00000459980 809 ntBASIC15.32■□□□□ 0.04
CDH1P12830 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH1P12830 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 AC097493.3-201ENST00000509725 367 ntBASIC15.32■□□□□ 0.04
CDH1P12830 IGHV3-42-201ENST00000520410 361 ntBASIC15.32■□□□□ 0.04
CDH1P12830 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH1P12830 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CDH1P12830 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.32■□□□□ 0.04
CDH1P12830 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH1P12830 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.32■□□□□ 0.04
CDH1P12830 AL158211.3-201ENST00000607385 239 ntBASIC15.32■□□□□ 0.04
CDH1P12830 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDH1P12830 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH1P12830 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDH1P12830 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH1P12830 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDH1P12830 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH1P12830 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH1P12830 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH1P12830 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH1P12830 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 AC138035.3-201ENST00000622706 2791 ntBASIC15.31■□□□□ 0.04
CDH1P12830 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDH1P12830 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH1P12830 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CDH1P12830 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDH1P12830 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDH1P12830 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDH1P12830 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms